#!/usr/bin/perl -w
#
# dbmerge2.pm
# Copyright (C) 1991-2022 by John Heidemann <johnh@isi.edu>
#
# This program is distributed under terms of the GNU general
# public license, version 2. See the file COPYING
# in $dblibdir for details.
#
=head1 NAME
dbmerge2 - merge exactly two inputs in sorted order based on the the specified columns
=head1 SYNOPSIS
dbmerge2 --input A.fsdb --input B.fsdb [-T TemporaryDirectory] [-nNrR] column [column...]
or
cat A.fsdb | dbmerge2 --input B.fsdb [-T TemporaryDirectory] [-nNrR] column [column...]
=head1 DESCRIPTION
Merge exactly two sorted input files, producing one sorted result.
Inputs can both be specified with C<--input>, or one can come
from standard input and the other from C<--input>.
Inputs must have identical schemas (columns, column order,
and field separators).
Dbmerge2 consumes a fixed amount of memory regardless of input size.
Although described above as a command line too, the command line
version of dbmerge2 is not installed by default.
Dbmerge2 is used primarily internal to perl;
L<dbmerge(1)> is the command-line tool for user use.
Warning: we do not verify that each input is actually sorted.
Incorrect merge results will occur if they are not.
=head1 OPTIONS
General option:
=over 4
=item B<--saveoutput $OUT_REF>
Save output writer (for integration with other fsdb filters).
=item <-T TmpDir>
where to put tmp files.
Also uses environment variable TMPDIR, if -T is
not specified.
Default is /tmp.
=back
Sort specification options (can be interspersed with column names):
=over 4
=item B<-r> or B<--descending>
sort in reverse order (high to low)
=item B<-R> or B<--ascending>
sort in normal order (low to high)
=item B<-n> or B<--numeric>
sort numerically
=item B<-N> or B<--lexical>
sort lexicographically
=back
=for comment
begin_standard_fsdb_options
This module also supports the standard fsdb options:
=over 4
=item B<-d>
Enable debugging output.
=item B<-i> or B<--input> InputSource
Read from InputSource, typically a file name, or C<-> for standard input,
or (if in Perl) a IO::Handle, Fsdb::IO or Fsdb::BoundedQueue objects.
=item B<-o> or B<--output> OutputDestination
Write to OutputDestination, typically a file name, or C<-> for standard output,
or (if in Perl) a IO::Handle, Fsdb::IO or Fsdb::BoundedQueue objects.
=item B<--autorun> or B<--noautorun>
By default, programs process automatically,
but Fsdb::Filter objects in Perl do not run until you invoke
the run() method.
The C<--(no)autorun> option controls that behavior within Perl.
=item B<--header> H
Use H as the full Fsdb header, rather than reading a header from
then input.
=item B<--help>
Show help.
=item B<--man>
Show full manual.
=back
=for comment
end_standard_fsdb_options
=head1 SAMPLE USAGE
=head2 Input:
File F<a.fsdb>:
#fsdb cid cname
11 numanal
10 pascal
File F<b.fsdb>:
#fsdb cid cname
12 os
13 statistics
=head2 Command:
dbmerge2 --input a.fsdb --input b.fsdb cname
or
cat a.fsdb | dbmerge2 --input b.fsdb cname
=head2 Output:
#fsdb cid cname
11 numanal
12 os
10 pascal
13 statistics
# | dbmerge2 --input a.fsdb --input b.fsdb cname
=head1 SEE ALSO
L<dbmerge(1)>,
L<dbsort(1)>,
L<Fsdb(3)>
=cut
# WARNING: This code is derived from dbmerge2.pm; that is the master copy.
use Fsdb::Filter::dbmerge2;
my $f = new Fsdb::Filter::dbmerge2(@ARGV);
$f->setup_run_finish; # or could just --autorun
exit 0;
=head1 AUTHOR and COPYRIGHT
Copyright (C) 1991-2022 by John Heidemann <johnh@isi.edu>
This program is distributed under terms of the GNU general
public license, version 2. See the file COPYING
with the distribution for details.
=cut
1;