#!/usr/bin/perl -w
#
# dbcoldefine.pm
# Copyright (C) 1991-2016 by John Heidemann <johnh@isi.edu>
#
# This program is distributed under terms of the GNU general
# public license, version 2. See the file COPYING
# in $dblibdir for details.
#
package Fsdb::Filter::dbcoldefine;
=head1 NAME
dbcoldefine - define the columns of a plain text file to make it an Fsdb file
=head1 SYNOPSIS
dbcoldefine [-F x] [column...]
=head1 DESCRIPTION
This program writes a new header before the data with the specified column
names. It does I<not> do any validation of the data contents;
it is up to the user to verify that, other than the header,
the input datastream is a correctly formatted Fsdb file.
=head1 OPTIONS
=over 4
=item B<-F> or B<--fs> or B<--fieldseparator> s
Specify the field separator.
=item B<--header> H
Give the columns and field separator as a full Fsdb header
(including C<#fsdb>).
Can only be used alone, not with other specifications.
=back
=for comment
begin_standard_fsdb_options
This module also supports the standard fsdb options:
=over 4
=item B<-d>
Enable debugging output.
=item B<-i> or B<--input> InputSource
Read from InputSource, typically a file name, or C<-> for standard input,
or (if in Perl) a IO::Handle, Fsdb::IO or Fsdb::BoundedQueue objects.
=item B<-o> or B<--output> OutputDestination
Write to OutputDestination, typically a file name, or C<-> for standard output,
or (if in Perl) a IO::Handle, Fsdb::IO or Fsdb::BoundedQueue objects.
=item B<--autorun> or B<--noautorun>
By default, programs process automatically,
but Fsdb::Filter objects in Perl do not run until you invoke
the run() method.
The C<--(no)autorun> option controls that behavior within Perl.
=item B<--help>
Show help.
=item B<--man>
Show full manual.
=back
=for comment
end_standard_fsdb_options
=head1 SAMPLE USAGE
=head2 Input:
102400 4937974.964736
102400 4585247.875904
102400 5098141.207123
=head2 Command:
cat DATA/http_bandwidth | dbcoldefine size bw
=head2 Output:
#fsdb size bw
102400 4937974.964736
102400 4585247.875904
102400 5098141.207123
# | dbcoldefine size bw
=head1 SEE ALSO
L<Fsdb>.
L<dbfilestripcomments>
=head1 CLASS FUNCTIONS
=cut
@ISA = qw(Fsdb::Filter);
($VERSION) = 2.0;
use strict;
use Pod::Usage;
use Carp;
use Fsdb::Filter;
use Fsdb::IO::Writer;
=head2 new
$filter = new Fsdb::Filter::dbcoldefine(@arguments);
Create a new dbcoldefine object, taking command-line arguments.
=cut
sub new ($@) {
my $class = shift @_;
my $self = $class->SUPER::new(@_);
bless $self, $class;
$self->set_defaults;
$self->parse_options(@_);
$self->SUPER::post_new();
return $self;
}
=head2 set_defaults
$filter->set_defaults();
Internal: set up defaults.
=cut
sub set_defaults ($) {
my($self) = @_;
$self->SUPER::set_defaults();
$self->{_fscode} = 'D';
$self->{_cols} = [];
$self->{_header} = undef;
}
=head2 parse_options
$filter->parse_options(@ARGV);
Internal: parse command-line arguments.
=cut
sub parse_options ($@) {
my $self = shift @_;
my(@argv) = @_;
$self->get_options(
\@argv,
'help|?' => sub { pod2usage(1); },
'man' => sub { pod2usage(-verbose => 2); },
'autorun!' => \$self->{_autorun},
'close!' => \$self->{_close},
'd|debug+' => \$self->{_debug},
'F|fs|fieldseparator|columnseparator=s' => \$self->{_fscode},
'header=s' => \$self->{_header},
'i|input=s' => sub { $self->parse_io_option('input', @_); },
'log!' => \$self->{_logprog},
'o|output=s' => sub { $self->parse_io_option('output', @_); },
) or pod2usage(2);
push (@{$self->{_cols}}, @argv);
}
=head2 setup
$filter->setup();
Internal: setup, parse headers.
=cut
sub setup ($) {
my($self) = @_;
my(@finish_args) = (-comment_handler => $self->create_pass_comments_sub);
if (!defined($self->{_header}) && $#{$self->{_cols}} == -1) {
croak($self->{_prog} . ": must specify either --header or columns.\n");
} elsif (defined($self->{_header}) && $#{$self->{_cols}} == -1) {
push(@finish_args, -header => $self->{_header});
} elsif (!defined($self->{_header}) && $#{$self->{_cols}} > -1) {
push(@finish_args, -fscode => $self->{_fscode}, -cols => $self->{_cols});
} else {
croak($self->{_prog} . ": cannot specific both --header and columns.\n");
};
# all the hard work is on the next line where we force the right codes
$self->finish_io_option('input', @finish_args);
$self->finish_io_option('output', -clone => $self->{_in});
}
=head2 run
$filter->run();
Internal: run over each rows.
=cut
sub run ($) {
my($self) = @_;
# can't get any easier than this
my $read_fastpath_sub = $self->{_in}->fastpath_sub();
my $write_fastpath_sub = $self->{_out}->fastpath_sub();
my $fref;
while ($fref = &$read_fastpath_sub()) {
&$write_fastpath_sub($fref);
};
}
=head1 AUTHOR and COPYRIGHT
Copyright (C) 1991-2016 by John Heidemann <johnh@isi.edu>
This program is distributed under terms of the GNU general
public license, version 2. See the file COPYING
with the distribution for details.
=cut
1;