#!/usr/bin/perl -w
#
# dbrowcount.pm
# Copyright (C) 2007-2022 by John Heidemann <johnh@isi.edu>
# $Id: 83fba9f283f462ac2039ab283fe5e131f7390a09 $
#
# This program is distributed under terms of the GNU general
# public license, version 2. See the file COPYING
# in $dblibdir for details.
#
package Fsdb::Filter::dbrowcount;
=head1 NAME
dbrowcount - count the number of rows in an Fsdb stream
=head1 SYNOPSIS
dbrowcount
=head1 DESCRIPTION
Count the number of rows and write out a new fsdb file
with one column (n) and one value: the number of rows.
This program is a strict subset of L<dbcolstats>.
Although there are other ways to get a count of rows
(C<dbcolstats>, or C<dbrowaccumulate -C 1> and some processing),
counting is so common it warrants its own command.
(For example, consider how often C<wc -l> is used in regular shell
scripting.)
There are some gross and subtle differences, though, in that
C<dbrowcount> doesn't require one to specify a column to search,
and it also doesn't look for and skip null data items.
=head1 OPTIONS
No program-specific options.
=for comment
begin_standard_fsdb_options
This module also supports the standard fsdb options:
=over 4
=item B<-d>
Enable debugging output.
=item B<-i> or B<--input> InputSource
Read from InputSource, typically a file name, or C<-> for standard input,
or (if in Perl) a IO::Handle, Fsdb::IO or Fsdb::BoundedQueue objects.
=item B<-o> or B<--output> OutputDestination
Write to OutputDestination, typically a file name, or C<-> for standard output,
or (if in Perl) a IO::Handle, Fsdb::IO or Fsdb::BoundedQueue objects.
=item B<--autorun> or B<--noautorun>
By default, programs process automatically,
but Fsdb::Filter objects in Perl do not run until you invoke
the run() method.
The C<--(no)autorun> option controls that behavior within Perl.
=item B<--help>
Show help.
=item B<--man>
Show full manual.
=back
=for comment
end_standard_fsdb_options
=head1 SAMPLE USAGE
=head2 Input:
#fsdb absdiff
0
0.046953
0.072074
0.075413
0.094088
0.096602
# | /home/johnh/BIN/DB/dbrow
# | /home/johnh/BIN/DB/dbcol event clock
# | dbrowdiff clock
# | /home/johnh/BIN/DB/dbcol absdiff
=head2 Command:
cat data.fsdb | dbrowcount
=head2 Output:
#fsdb n
6
# | /home/johnh/BIN/DB/dbrow
# | /home/johnh/BIN/DB/dbcol event clock
# | dbrowdiff clock
# | /home/johnh/BIN/DB/dbcol absdiff
=head2 Input 2:
As another example, this input produces the same output as above in
C<dbrowcount>, but different output in C<dbstats>:
#fsdb absdiff
-
-
-
-
-
-
# | /home/johnh/BIN/DB/dbrow
# | /home/johnh/BIN/DB/dbcol event clock
# | dbrowdiff clock
# | /home/johnh/BIN/DB/dbcol absdiff
=head1 SEE ALSO
L<dbcolaccumulate(1)>,
L<dbcolstats(1)>,
L<Fsdb(3)>
=head1 CLASS FUNCTIONS
=cut
@ISA = qw(Fsdb::Filter);
($VERSION) = 2.0;
use strict;
use Pod::Usage;
use Carp;
use Fsdb::Filter;
use Fsdb::IO::Reader;
use Fsdb::IO::Writer;
=head2 new
$filter = new Fsdb::Filter::dbrowcount(@arguments);
=cut
sub new {
my $class = shift @_;
my $self = $class->SUPER::new(@_);
bless $self, $class;
$self->set_defaults;
$self->parse_options(@_);
$self->SUPER::post_new();
return $self;
}
=head2 set_defaults
$filter->set_defaults();
Internal: set up defaults.
=cut
sub set_defaults ($) {
my($self) = @_;
$self->SUPER::set_defaults();
$self->{_fscode} = undef;
}
=head2 parse_options
$filter->parse_options(@ARGV);
Internal: parse options
=cut
sub parse_options ($@) {
my $self = shift @_;
$self->get_options(
\@_,
'help|?' => sub { pod2usage(1); },
'man' => sub { pod2usage(-verbose => 2); },
'autorun!' => \$self->{_autorun},
'close!' => \$self->{_close},
'F|fs|cs|fieldseparator|columnseparator=s' => \$self->{_fscode},
'i|input=s' => sub { $self->parse_io_option('input', @_); },
'log!' => \$self->{_logprog},
'o|output=s' => sub { $self->parse_io_option('output', @_); },
) or pod2usage(2);
}
=head2 setup
$filter->setup();
Internal: setup, parse headers.
=cut
sub setup ($) {
my($self) = @_;
$self->finish_io_option('input', -comment_handler => $self->create_delay_comments_sub);
my @output_options = (-cols => [qw(n:q)]);
unshift (@output_options, -fscode => $self->{_fscode})
if (defined($self->{_fscode}));
$self->finish_io_option('output', @output_options);
}
=head2 run
$filter->run();
Internal: run over all IO
=cut
sub run ($) {
my($self) = @_;
my $read_fastpath_sub = $self->{_in}->fastpath_sub();
my $n = 0;
my $fref;
while ($fref = &$read_fastpath_sub()) {
$n++;
};
$self->{_out}->write_row_from_aref( [ $n ] );
}
=head2 finish
$filter->finish();
Internal: write trailer.
=cut
#sub finish ($) {
# my($self) = @_;
#
# $self->SUPER::finish();
#}
=head1 AUTHOR and COPYRIGHT
Copyright (C) 2007-2022 by John Heidemann <johnh@isi.edu>
This program is distributed under terms of the GNU general
public license, version 2. See the file COPYING
with the distribution for details.
=cut
1;